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  "Title": "Create Standalone and Composite Plots in 'ggplot2' for\nPublications",
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  "Authors@R": "person(\ngiven = \"Seung Hyun\",\nfamily = \"Min\",\nrole = c(\"aut\", \"cre\"),\nemail = \"seung.min@mail.mcgill.ca\"\n)",
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  "Description": "Provides functions for creating and annotating a composite\nplot in 'ggplot2'. Offers background themes and shortcut\nplotting functions that produce figures that are appropriate\nfor the format of scientific journals. Some methods are\ndescribed in Min and Zhou (2021)\n<doi:10.3389/fgene.2021.802894>.",
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  "BugReports": "https://github.com/smin95/smplot2/issues",
  "Config/pak/sysreqs": "cmake make libicu-dev libuv1-dev",
  "Repository": "https://smin95.r-universe.dev",
  "Date/Publication": "2025-02-03 13:49:23 UTC",
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    "sm_add_text",
    "sm_auc",
    "sm_auc_all",
    "sm_bar",
    "sm_bland_altman",
    "sm_boxplot",
    "sm_ci",
    "sm_classic",
    "sm_color",
    "sm_common_axis",
    "sm_common_legend",
    "sm_common_title",
    "sm_common_xlabel",
    "sm_common_ylabel",
    "sm_corr_avgErr",
    "sm_effsize",
    "sm_forest",
    "sm_forest_annot",
    "sm_hgrid",
    "sm_hist",
    "sm_hvgrid",
    "sm_hvgrid_minor",
    "sm_minimal",
    "sm_palette",
    "sm_panel_label",
    "sm_plot_clean",
    "sm_pointplot",
    "sm_power",
    "sm_put_together",
    "sm_raincloud",
    "sm_slope",
    "sm_slope_all",
    "sm_slope_mean",
    "sm_slope_theme",
    "sm_statBlandAlt",
    "sm_statCorr",
    "sm_stdErr",
    "sm_vgrid",
    "sm_violin"
  ],
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    {
      "page": "sm_add_legend",
      "title": "Adding a common legend on a combined figure",
      "topics": [
        "sm_add_legend"
      ]
    },
    {
      "page": "sm_add_point",
      "title": "Add a point annotation onto the combined plot",
      "topics": [
        "sm_add_point"
      ]
    },
    {
      "page": "sm_add_text",
      "title": "Add a text annotation onto the combined plot",
      "topics": [
        "sm_add_text"
      ]
    },
    {
      "page": "sm_auc",
      "title": "Calculation of the Area under a Curve (Trapezoidal numerical integration)",
      "topics": [
        "sm_auc"
      ]
    },
    {
      "page": "sm_auc_all",
      "title": "Calculating Area under Curve across multiple conditions and subjects",
      "topics": [
        "sm_auc_all"
      ]
    },
    {
      "page": "sm_bar",
      "title": "Bar Plot with Jittered Individual Points",
      "topics": [
        "sm_bar"
      ]
    },
    {
      "page": "sm_bland_altman",
      "title": "A Bland Altman plot",
      "topics": [
        "sm_bland_altman"
      ]
    },
    {
      "page": "sm_boxplot",
      "title": "A Boxplot with Jittered Individual Points",
      "topics": [
        "sm_boxplot"
      ]
    },
    {
      "page": "sm_ci",
      "title": "Confidence interval",
      "topics": [
        "sm_ci"
      ]
    },
    {
      "page": "sm_classic",
      "title": "A classical theme.",
      "topics": [
        "sm_classic"
      ]
    },
    {
      "page": "sm_color",
      "title": "SM custom palette of colors",
      "topics": [
        "sm_color"
      ]
    },
    {
      "page": "sm_common_axis",
      "title": "A function to plot panels with common x- and y- axes",
      "topics": [
        "sm_common_axis"
      ]
    },
    {
      "page": "sm_common_legend",
      "title": "Creating a common legend for subplots on a separate panel",
      "topics": [
        "sm_common_legend"
      ]
    },
    {
      "page": "sm_common_title",
      "title": "Common title for combined subplots",
      "topics": [
        "sm_common_title"
      ]
    },
    {
      "page": "sm_common_xlabel",
      "title": "Common x-axis label (title) for combined subplots",
      "topics": [
        "sm_common_xlabel"
      ]
    },
    {
      "page": "sm_common_ylabel",
      "title": "Common y-axis label (title) for combined subplots",
      "topics": [
        "sm_common_ylabel"
      ]
    },
    {
      "page": "sm_corr_avgErr",
      "title": "Superimposition of the average point with horizontal and vertical error bars in the correlation plot",
      "topics": [
        "sm_corr_avgErr"
      ]
    },
    {
      "page": "sm_effsize",
      "title": "Cohen's d - effect size",
      "topics": [
        "sm_effsize"
      ]
    },
    {
      "page": "sm_forest",
      "title": "Forest plot",
      "topics": [
        "sm_forest"
      ]
    },
    {
      "page": "sm_forest_annot",
      "title": "Annotation of the error range on the forest plot",
      "topics": [
        "sm_forest_annot"
      ]
    },
    {
      "page": "sm_hgrid",
      "title": "A minimalistic theme of horizontal major grids",
      "topics": [
        "sm_hgrid"
      ]
    },
    {
      "page": "sm_hist",
      "title": "Histogram with kernel density estimation (Gaussian) and rugs",
      "topics": [
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      ]
    },
    {
      "page": "sm_hvgrid",
      "title": "A minimalistic theme with major horizontal and vertical grids",
      "topics": [
        "sm_hvgrid"
      ]
    },
    {
      "page": "sm_hvgrid_minor",
      "title": "A theme with horizontal and vertical major and minor grids",
      "topics": [
        "sm_hvgrid_minor"
      ]
    },
    {
      "page": "sm_minimal",
      "title": "A minimal theme (no grid) with borders.",
      "topics": [
        "sm_minimal"
      ]
    },
    {
      "page": "sm_palette",
      "title": "A custom palette of colors",
      "topics": [
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      ]
    },
    {
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      "title": "Writing a label for each panel of a combined figure",
      "topics": [
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      ]
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    {
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      "topics": [
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      ]
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      "topics": [
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      "page": "sm_put_together",
      "title": "Combine Multiple Plots into a Single Composite Figure",
      "topics": [
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      "page": "sm_raincloud",
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      "topics": [
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      "page": "sm_slope",
      "title": "Slope Chart",
      "topics": [
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      ]
    },
    {
      "page": "sm_slope_all",
      "title": "Calculating the slope across multiple conditions and subjects",
      "topics": [
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    {
      "page": "sm_slope_theme",
      "title": "SM plot with a theme appropriate for the slope chart",
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      ]
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      "topics": [
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      ]
    },
    {
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      "title": "Linear regression slope and statistical values (R or R2 and p values) from a paired correlation test.",
      "topics": [
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      ]
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    {
      "page": "sm_stdErr",
      "title": "Standard error",
      "topics": [
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      ]
    },
    {
      "page": "sm_vgrid",
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      ]
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    {
      "page": "sm_violin",
      "title": "Violin Plot with Jittered Individual Points",
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